chen, Tsute: search on Z-Library

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1

The oral bacterial microbiome of occlusal surfaces in children and its association with diet and caries

Ribeiro, Apoena Aguiar, Azcarate-Peril, Maria Andrea, Cadenas, Maria Belen, Butz, Natasha, Paster, Bruce J., Chen, Tsute, Bair, Eric, Arnold, Roland R., Nascimento, Marcelle

Journal:

Year:

2017

Language:

english

File:

PDF, 4.95 MB

english, 2017

2

Supragingival mycobiome and inter-kingdom interactions in dental caries

Baraniya, Divyashri, Chen, Tsute, Nahar, Anubhav, Alakwaa, Fadhl, Hill, Jennifer, Tellez, Marisol, Ismail, Amid, Puri, Sumant, Al-Hebshi, Nezar Noor

Journal:

Journal of Oral Microbiology

Year:

2020

File:

PDF, 2.22 MB

2020

3

New Insights into Human Nostril Microbiome from the Expanded Human Oral Microbiome Database (eHOMD): a Resource for the Microbiome of the Human Aerodigestive Tract

Escapa, Isabel F., Chen, Tsute, Huang, Yanmei, Gajare, Prasad, Dewhirst, Floyd E., Lemon, Katherine P., Xu, Jian

Journal:

Year:

2018

Language:

english

File:

PDF, 1.15 MB

english, 2018

4

A positive feedback loop mediated by Sigma X enhances expression of the streptococcal regulator ComR

Khan, Rabia, Junges, Roger, Åmdal, Heidi A., Chen, Tsute, Morrison, Donald A., Petersen, Fernanda C.

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 3.43 MB

english, 2017

5

Comparative genomics and proteomics of 13 Porphyromonas gingivalis strains

Chen, Tsute, Siddiqui, Huma, Olsen, Ingar

Journal:

Journal of Oral Microbiology

Year:

2015

Language:

english

File:

PDF, 596 KB

english, 2015

6

Draft Genome Sequence of Tannerella forsythia Type Strain ATCC 43037

Friedrich, Valentin, Pabinger, Stephan, Chen, Tsute, Messner, Paul, Dewhirst, Floyd E., Schäffer, Christina

Journal:

Genome Announcements

Year:

2015

Language:

english

File:

PDF, 154 KB

english, 2015

7

Microbiological and bioinformatics analysis of primary Sjögren's syndrome patients with normal salivation §

Siddiqui, Huma, Chen, Tsute, Aliko, Ardita, Mydel, Piotr M, Jonsson, Roland, Olsen, Ingar

Journal:

Journal of Oral Microbiology

Year:

2016

Language:

english

File:

PDF, 1.89 MB

english, 2016

8

Genome Sequence of Highly Virulent Pseudomonas aeruginosa Strain VA-134, Isolated from a Burn Patient

Miller, Christine L., Chen, Tsute, Chen, Ping, Leung, Kai P.

Journal:

Genome Announcements

Year:

2016

Language:

english

File:

PDF, 137 KB

english, 2016

9

Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets

F. Escapa, Isabel, Huang, Yanmei, Chen, Tsute, Lin, Maoxuan, Kokaras, Alexis, Dewhirst, Floyd E., Lemon, Katherine P.

Journal:

Year:

2020

File:

PDF, 1.46 MB

2020

10

Strand-specific transcriptome profiling with directly labeled RNA on genomic tiling microarrays

Wen-Han Yu, Hedda Høvik, Ingar Olsen, Tsute Chen

Journal:

BMC Molecular Biology

Year:

2011

Language:

english

File:

PDF, 864 KB

english, 2011

11

Community-wide transcriptome of the oral microbiome in subjects with and without periodontitis

Duran-Pinedo, Ana E, Chen, Tsute, Teles, Ricardo, Starr, Jacqueline R, Wang, Xiaoshan, Krishnan, Keerthana, Frias-Lopez, Jorge

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 3.12 MB

english, 2014

12

Oral Microbiota Shift after 12-Week Supplementation with Lactobacillus reuteri DSM 17938 and PTA 5289; A Randomized Control Trial

Romani Vestman, Nelly, Chen, Tsute, Lif Holgerson, Pernilla, Öhman, Carina, Johansson, Ingegerd, Suchodolski, Jan S

Journal:

Year:

2015

Language:

english

File:

PDF, 1.90 MB

english, 2015

13

Inflammatory bacteriome featuring Fusobacterium nucleatum and Pseudomonas aeruginosa identified in association with oral squamous cell carcinoma

Al-hebshi, Nezar Noor, Nasher, Akram Thabet, Maryoud, Mohamed Yousef, Homeida, Husham E., Chen, Tsute, Idris, Ali Mohamed, Johnson, Newell W.

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 2.99 MB

english, 2017

14

Tongue microbiome of smokeless tobacco users

Halboub, Esam, Al-Akâhali, Mohammed S., Alamir, Abdulwahab H., Homeida, Husham E., Baraniya, Divyashri, Chen, Tsute, Al-Hebshi, Nezar Noor

Journal:

BMC Microbiology

Year:

2020

File:

PDF, 1.59 MB

2020

15

Functional profiles of coronal and dentin caries in children

Kressirer, Christine A, Chen, Tsute, Lake Harriman, Kristie, Frias-Lopez, Jorge, Dewhirst, Floyd E, Tavares, Mary A, Tanner, Anne CR

Journal:

Journal of Oral Microbiology

Year:

2018

Language:

english

File:

PDF, 2.13 MB

english, 2018

16

Dynamic probe selection for studying microbial transcriptome with high-density genomic tiling microarrays

Hedda Høvik, Tsute Chen

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 1.12 MB

english, 2010

17

Whole-Genome Sequence of Multidrug-Resistant Pseudomonas aeruginosa Strain BAMCPA07-48, Isolated from a Combat Injury Wound

Sanjar, Fatemeh, Karna, S. L. Rajasekhar, Chen, Tsute, Chen, Ping, Abercrombie, Johnathan J., Leung, Kai P.

Journal:

Genome Announcements

Year:

2016

Language:

english

File:

PDF, 157 KB

english, 2016

18

The Microbiomes of Pancreatic and Duodenum Tissue Overlap and are Highly Subject Specific but Differ between Pancreatic Cancer and Non-Cancer Subjects

Del Castillo, Erika, Meier, Richard, Chung, Mei, Koestler, Devin C., Chen, Tsute, Paster, Bruce J, Charpentier, Kevin, Kelsey, Karl T., Izard, Jacques, Michaud, Dominique S.

Journal:

Cancer Epidemiology Biomarkers & Prevention

Year:

2018

Language:

english

File:

PDF, 2.68 MB

english, 2018

19

Sublethal Concentrations of Carbapenems Alter Cell Morphology and Genomic Expression of Klebsiella pneumoniae Biofilms

Van Laar, Tricia A., Chen, Tsute, You, Tao, Leung, Kai P.

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2015

Language:

english

File:

PDF, 1020 KB

english, 2015

20

Global transcriptome responses including small RNAs during mixed-species interactions with methicillin-resistant Staphylococcus aureus and Pseudomonas aeruginosa

Miller, Christine L., Van Laar, Tricia A., Chen, Tsute, Karna, S. L. Rajasekhar, Chen, Ping, You, Tao, Leung, Kai P.

Journal:

MicrobiologyOpen

Year:

2016

Language:

english

File:

PDF, 1.46 MB

english, 2016

21

Detection, Cloning, and Sequence Analysis of an Indigenous Plasmid from Cellulolytic Clostridial Strain MCF1

Tsute Chen, Lillian Ouko, Thomas Warnick, Susan Leschine

Journal:

Year:

2000

Language:

english

File:

PDF, 64 KB

english, 2000

22

Metagenome sequencing-based strain-level and functional characterization of supragingival microbiome associated with dental caries in children

Al-Hebshi, Nezar Noor, Baraniya, Divyashri, Chen, Tsute, Hill, Jennifer, Puri, Sumant, Tellez, Marisol, Hasan, Nur A., Colwell, Rita R., Ismail, Amid

Journal:

Journal of Oral Microbiology

Year:

2019

Language:

english

File:

PDF, 2.66 MB

english, 2019

23

Isolation and cultivation of candidate phyla radiation Saccharibacteria (TM7) bacteria in coculture with bacterial hosts

Murugkar, Pallavi P., Collins, Andrew J., Chen, Tsute, Dewhirst, Floyd E.

Journal:

Journal of Oral Microbiology

Year:

2020

File:

PDF, 1.42 MB

2020

24

Robust species taxonomy assignment algorithm for 16S rRNA NGS reads: application to oral carcinoma samples

Al-Hebshi, Nezar Noor, Nasher, Akram Thabet, Idris, Ali Mohamed, Chen, Tsute

Journal:

Journal of Oral Microbiology

Year:

2015

Language:

english

File:

PDF, 1.31 MB

english, 2015

25

A dysbiotic mycobiome dominated by Candida albicans is identified within oral squamous-cell carcinomas

Perera, Manosha, Al-hebshi, Nezar Noor, Perera, Irosha, Ipe, Deepak, Ulett, Glen C., Speicher, David J., Chen, Tsute, Johnson, Newell W.

Journal:

Journal of Oral Microbiology

Year:

2017

Language:

english

File:

PDF, 1.63 MB

english, 2017

26

Dermal wound transcriptomic responses to Infection withPseudomonas aeruginosaversusKlebsiella pneumoniaein a rabbit ear wound model

Leung, Kai P, D’Arpa, Peter, Seth, Akhil K, Geringer, Matthew R, Jett, Marti, Xu, Wei, Hong, Seok J, Galiano, Robert D, Chen, Tsute, Mustoe, Thomas A

Journal:

BMC Clinical Pathology

Year:

2014

Language:

english

File:

PDF, 355 KB

english, 2014

27

RsmW, Pseudomonas aeruginosa small non-coding RsmA-binding RNA upregulated in biofilm versus planktonic growth conditions

Miller, Christine L., Romero, Manuel, Karna, S. L. Rajasekhar, Chen, Tsute, Heeb, Stephan, Leung, Kai P.

Journal:

BMC Microbiology

Year:

2016

Language:

english

File:

PDF, 3.06 MB

english, 2016

28

Comparative analyses identified species-specific functional roles in oral microbial genomes

Chen, Tsute, Gajare, Prasad, Olsen, Ingar, Dewhirst, Floyd E.

Journal:

Journal of Oral Microbiology

Year:

2017

Language:

english

File:

PDF, 480 KB

english, 2017

29

Genetic exchange and reassignment in Porphyromonas gingivalis

Olsen, Ingar, Chen, Tsute, Tribble, Gena D

Journal:

Journal of Oral Microbiology

Year:

2018

Language:

english

File:

PDF, 1.65 MB

english, 2018

30

Resolvin E1 Promotes Bone Preservation Under Inflammatory Conditions

El Kholy, Karim, Freire, Marcelo, Chen, Tsute, Van Dyke, Thomas E.

Journal:

Frontiers in Immunology

Year:

2018

Language:

english

File:

PDF, 5.62 MB

english, 2018

31

Species-level core oral bacteriome identified by 16S rRNA pyrosequencing in a healthy young Arab population

Al-hebshi, Nezar Noor, Abdulhaq, Ahmed, Albarrag, Ahmed, Basode, Vinod Kumar, chen, Tsute

Journal:

Journal of Oral Microbiology

Year:

2016

Language:

english

File:

PDF, 1.99 MB

english, 2016

32

Maresin-1 and Resolvin E1 Promote Regenerative Properties of Periodontal Ligament Stem Cells Under Inflammatory Conditions

Albuquerque-Souza, Emmanuel, Schulte, Fabian, Chen, Tsute, Hardt, Markus, Hasturk, Hatice, Van Dyke, Thomas E., Holzhausen, Marinella, Kantarci, Alpdogan

Journal:

Frontiers in Immunology

Year:

2020

File:

PDF, 5.83 MB

2020

33

Gingipain adhesin domains mediate Porphyromonas gingivalis adherence to epithelial cells

Tsute Chen, Margaret J Duncan

Journal:

Microbial Pathogenesis

Year:

2004

Language:

english

File:

PDF, 206 KB

english, 2004

34

A Quorum-Sensing System That Regulates Streptococcus pneumoniae Biofilm Formation and Surface Polysaccharide Production

Junges, Roger, Salvadori, Gabriela, Shekhar, Sudhanshu, Åmdal, Heidi A., Periselneris, Jimstan N., Chen, Tsute, Brown, Jeremy S., Petersen, Fernanda C., Ellermeier, Craig D.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.72 MB

english, 2017

35

Subgingival microbiome of experimental gingivitis: shifts associated with the use of chlorhexidine and N -acetyl cysteine mouthwashes

Al-Kamel, Ahlam, Baraniya, Divyashri, Al-Hajj, Wadhah Abdulnaser, Halboub, Esam, Abdulrab, Saleem, Chen, Tsute, Al-Hebshi, Nezar Noor

Journal:

Journal of Oral Microbiology

Year:

2019

Language:

english

File:

PDF, 2.64 MB

english, 2019

36

The Oral Mouse Microbiome Promotes Tumorigenesis in Oral Squamous Cell Carcinoma

Stashenko, Philip, Yost, Susan, Choi, Yoonhee, Danciu, Theodora, Chen, Tsute, Yoganathan, Subbiah, Kressirer, Christine, Ruiz-Tourrella, Montserrat, Das, Bikul, Kokaras, Alexis, Frias-Lopez, Jorge, Bi

Journal:

Year:

2019

Language:

english

File:

PDF, 7.71 MB

english, 2019

37

[BMJ Publishing Group Ltd and European League Against Rheumatism Annual European Congress of Rheumatology, EULAR 2019, Madrid, 12â15 June 2019 - ()] Saturday, 15 June 2019 - SAT0499âORAL MICROBIOME IN CHILDREN WITH JUVENILE IDIOPATHIC ARTHRITISIN RELATION TO DISEASE STATUS, TEMPOROMANDIBULAR JOINT ARTHRITIS AND MEDICATION: A NORWEGIAN 2-YEAR PROSPECTIVE STUDY

Frid, Paula, Halbig, Josefine, Baraniya, Divyashri, Rypdal, Veronika, Songstad, Nils Thomas, Rosen, Annika, Berstad, Johanna Rykke, Flato, Berit, Chen, Tsute, Al-Hebshi, Nezar Noor, Nordal, Ellen, Al-

Year:

2019

File:

PDF, 107 KB

2019

38

The hidden ‘mycobacteriome’ of the human healthy oral cavity and upper respiratory tract

Macovei, Lilia, McCafferty, Jon, Chen, Tsute, Teles, Flavia, Hasturk, Hatice, Paster, Bruce J., Campos-Neto, Antonio

Journal:

Journal of Oral Microbiology

Year:

2015

Language:

english

File:

PDF, 1.97 MB

english, 2015

39

A general method for direct sequencing of transposon mutants by randomly primed PCR

Tsute Chen, Rothsovann Yong, Hong Dong, Margaret J. Duncan

Journal:

Technical Tips Online

Year:

1999

Language:

english

File:

PDF, 149 KB

english, 1999

40

Genome Sequence of a Virulent Pseudomonas aeruginosa Strain, 12-4-4(59), Isolated from the Blood Culture of a Burn Patient

Karna, S. L. Rajasekhar, Chen, Tsute, Chen, Ping, Peacock, Trent J., Abercrombie, Johnathan J., Leung, Kai P.

Journal:

Genome Announcements

Year:

2016

Language:

english

File:

PDF, 138 KB

english, 2016

41

Identification and characterization of a minisatellite contained within a novel miniature inverted-repeat transposable element (MITE) ofPorphyromonas gingivalis

Klein, Brian A., Chen, Tsute, Scott, Jodie C., Koenigsberg, Andrea L., Duncan, Margaret J., Hu, Linden T.

Journal:

Year:

2015

Language:

english

File:

PDF, 2.22 MB

english, 2015

42

Oral microbiota in autoimmune polyendocrine syndrome type 1

Bruserud, Øyvind, Siddiqui, Huma, Marthinussen, Mihaela Cuida, Chen, Tsute, Jonsson, Roland, Oftedal, Bergithe Eikeland, Olsen, Ingar, Husebye, Eystein Sverre, Wolff, Anette Bøe

Journal:

Journal of Oral Microbiology

Year:

2018

Language:

english

File:

PDF, 1.61 MB

english, 2018

43

In silico Comparison of 19 Porphyromonas gingivalis Strains in Genomics, Phylogenetics, Phylogenomics and Functional Genomics

Chen, Tsute, Siddiqui, Huma, Olsen, Ingar

Journal:

Frontiers in Cellular and Infection Microbiology

Year:

2017

Language:

english

File:

PDF, 5.00 MB

english, 2017

44

Species-Level Salivary Microbial Indicators of Well-Resolved Periodontitis: A Preliminary Investigation

Acharya, Aneesha, Chen, Tsute, Chan, Yuki, Watt, Rory M., Jin, Lijian, Mattheos, Nikos

Journal:

Frontiers in Cellular and Infection Microbiology

Year:

2019

File:

PDF, 3.74 MB

2019

45

Porphyromonas gingivalis and its CRISPR-Cas system

Chen, Tsute, Olsen, Ingar

Journal:

Journal of Oral Microbiology

Year:

2019

Language:

english

File:

PDF, 954 KB

english, 2019

46

Differences in the Bacteriome of Smokeless Tobacco Products with Different Oral Carcinogenicity: Compositional and Predicted Functional Analysis

Al-hebshi, Nezar, Alharbi, Fahd, Mahri, Mohammed, Chen, Tsute

Journal:

Year:

2017

Language:

english

File:

PDF, 4.51 MB

english, 2017

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